| Rank | Team Name | Institution | Solved | Time |
| 1 | HITORI++ *
| The University of Tokyo | 8 | 1140 |
| (2) | kkntkr | The University of Tokyo | 7 | 744 |
| (2) | __________(andaasukoaazu) | The University of Tokyo | 7 | 901 |
| 2 | Fill it please | National Taiwan University (Taiwan) | 7 | 1022 |
| 3 | HugeHydralisk | Fudan University (China) | 7 | 1101 |
| 4 | Watch.c *
| The University of Aizu | 7 | 1312 |
| (5) | LittleBug | The University of Tokyo | 6 | 704 |
| 5 | na[^k] | Waseda University | 6 | 1067 |
| 6 | OTH {:-( | Tokyo Institute of Technology | 5 | 591 |
| 7 | ||| orz | Tohoku University | 5 | 712 |
| (8) | WARush | Tokyo Institute of Technology | 5 | 842 |
| 8 | d3sxp | Kyoto University | 4 | 373 |
| 9 | Maximum-Coffee-X | Saitama University | 4 | 574 |
| (10) | conservative | Kyoto University | 4 | 576 |
| 10 | Imo | Osaka University | 4 | 619 |
* Teams were advanced to the 2009 ACM-ICPC World Finals in Stockholm, Sweden
Honorable Mention
| Team Name | Institution |
| 40010 | Tokyo Institute of Technology |
| ActiveJ | The University of Aizu |
| Aegis II | City University of Hong Kong |
| Far | The University of Hong Kong |
| GINYUTOKUSENTAI | Nara Women's University |
| HinaToma1/2 | Kurume National College of Technology |
| International Collegiate Psycho Contest | Yonsei University |
| JamOji | Keio University |
| Macross Coding | Chiao Tung University |
| Musuka | Meiji University |
| NUT | University of Tsukuba |
| Q_start_X | Kyushu University |
| RecursiveCall | Ritsumeikan University |
| TOFU | Tsuyama National College of Technology |
| YOIZON | The University of Aizu |
| YukkuriShiteitteNE!!1!! | Tokyo University of Science |
| dig-bug | Toyohashi University of Technology |
| kinpaku | Kanazawa Institute of Technology |
| ksk(accelerated) | Hiroshima University |
| main=-277; | Osaka Electro-Communication University |
